33 karma · joined July 30, 2021
* CV: https://drive.google.com/file/d/1Pmd-jwZjUIAif0qPCyjs6Xk5URK7A9cN
Experienced in data analysis, machine learning, teaching, full stack web dev, self-hosted services, and various hobby projects such as drone hacking, home automation, and bots.
Main Languages: R, JavaScript, Python, C++, Common Lisp, SQL
Reproducibility: Docker, Conda, Biocontainers, and Guix
Pipelines: Galaxy, Nextflow, Snakemake
Management: Teaching, lecturing, mentoring, countless workshops, matrix management role.
I was part of the core Freiburg Galaxy scRNA-seq founding team, wrote tons of tools and trainings.
* Gitlab: https://gitlab.com/mtekman
* Github: https://github.com/mtekman
* ORCID: https://orcid.org/0000-0002-4181-2676
* Google Scholar: https://scholar.google.com/citations?hl=en&user=HVwU31YAAAAJ
* LinkedIn: https://www.linkedin.com/in/mehmet-tekman-4a08b484/
Contact: @mtekman:matrix.org or mtekman89@gmail.com
meet.hn/city/gb-London
Socials: - github.com/mtekman - linkedin.com/in/https://www.linkedin.com/in/mehmet-tekman-4a08b484/ - mtekman.at.hn
Interests: Science, Web Development, Programming, Data Science, AI/ML, Gaming, Hacking, Hardware, Mobile Development, Open Source, Research, Biotech
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Name: Mehmet
Location: UK or Germany
Work Preferences: Remote/Hybrid/Office
Technologies: R, Python, Javascript, C++, Common Lisp
Resume, CV, Contact: (see my bio)
Several postdocs in bioinformatics, familiar with many different bioinformatic pipelines, tons of teaching and workshop hosting experience, work well as liaison between informaticians and biologists/medics, full stack dev who has empowered many research groups with their own in-house analytical platforms and trained them in its use.Too long? GNU-obsessed Data Analyst with matrix management skills and a strong focus on reproducible environments and teaching what he knows to others.
At the time I thought he was the reason that the phone existed at all, not quite knowing the delicate politics between Symbian and Maemo at the time.
Still he smiled amicably enough and it's a treasured photo of mine.
https://gitlab.com/mtekman/runescape-motiondetector
It worked for about an hour before having the nasty habit of attacking monsters, chasing them out into the wilderness where you'd check in on your character and find him dead, barren, and lost.
Fun though.
https://gitlab.com/mtekman/iptables-autobanner
For those just wanting the blocklist, here is a table of malicious IP addresses, with columns of: address, number of ports tried, number of usernames tried.
Name: Mehmet
Location: UK or Germany
Work Preferences: Remote/Hybrid/Office
Technologies: R, Python, Javascript, C++, Common Lisp
Resume, CV, Contact: (see my bio)
Several postdocs in bioinformatics, familiar with many different bioinformatic pipelines, tons of teaching and workshop hosting experience, work well as liaison between informaticians and biologists/medics, full stack dev who has empowered many research groups with their own in-house analytical platforms and trained them in its use.Too long? GNU-obsessed Data Analyst with matrix management skills and a strong focus on reproducible environments and teaching what he knows to others.
Name: Mehmet
Location: UK or Germany
Work Preferences: Remote/Hybrid/Office
Technologies: R, Python, Javascript, C++, Common Lisp
Resume, CV, Contact: (see my bio)
Several postdocs in bioinformatics, familiar with many different bioinformatic pipelines, tons of teaching and workshop hosting experience, work well as liaison between informaticians and biologists/medics, full stack dev who has empowered many research groups with their own in-house analytical platforms and trained them in its use.Too long? GNU-obsessed Data Analyst with matrix management skills and a strong focus on reproducible environments and teaching what he knows to others.
It's essentially a manual firewall for when I disable ufw if it's being too aggressive:
Name: Mehmet
Location: UK or Germany
Work Preferences: Remote/Hybrid/Office
Technologies: R, Python, Javascript, C++, Common Lisp
Resume, CV, Contact: (see my bio)
Several postdocs in bioinformatics, familiar with many different bioinformatic pipelines, tons of teaching and workshop hosting experience, work well as liaison between informaticians and biologists/medics, full stack dev who has empowered many research groups with their own in-house analytical platforms and trained them in its use.Too long? GNU-obsessed Data Analyst with a strong focus on reproducible environments and teaching what he knows to others.
1: The tendency of a single cell to perform transcription in bursts of activity/inactivity, which averages in bulk tissue as a continuous variable.
Hello, I'm in a similar sort of transition position. May I ask where you applied (US/UK/EU-based?) and what your main experience was in adapting your academic CV to industry?
(Feel free to reach me by email or matrix too)
Before the bike lanes were common, you had to cut your teeth zipping between the cars in the narrow roads, keeping up with traffic speeds, annoying every driver who gave you an inch, terrifying bewildered tourists, and watching your face get smashed by door after door after door.
When the cycle lanes were rolled out, things became much safer between bikes and cars, but now all bikes are herded together and you experience a bike lane traffic as Mr Expensive Latex seems to have no idea how to pull over to let others pass whilst he's busy clicking in his shoes.
It's very safe now. I kind of miss the mad chaos London used to be when cycling, when only the dumb and the brave dared to battle the busses. When you'd get to work pumped with the adrenaline and the knowledge that you survived the journey
To go from 4 to 6, the public WiFi box will need to use a 4 to 6 "broker" and there are surprisingly few of these around and they're not usually free.
So basically, your home network and Pi is future-ready, but public infrastructure might need a moment...
No choice of desktop managers or window managers, just very lean and streamlined software with little redundancy
I think people like it because its neat.