Missing the context... What code was there before? Was it a reverse engineering of the API whatsapp binaries use? Is there any legal basis for demanding someone remove that?
https://github.com/venomous0x/WhatsAPI/tree/fd07b49a459cda25...
It was mostly used by websites offering a web based chat interface for WhatsApp and by spammers.
The "non-circumvention" clause in the DMCA is often used to go after people reverse engineering DRM, but I fail to see how it would be applicable in this case.