Using mysql_real_escape_string is almost a sign you're doing something wrong. You should be using prepared statements with PDO or mysqli.
> The point is that I can't audit (and would rather not waste my time doing so) this PHP code.
I wasn't going to bother, but this post is pretty high up on the front page. There's some XSS issues with the JSON output, the Content-Type header isn't set to 'application/json' so PHP decides to set it to 'text/html'. Now anyone that controls ipecho.net[0] or can execute commands as any user on the server[1] can XSS users of the panel.
If you'd like to confirm, go to /sh/ps.php and notice where the page breaks due to strings in the JSON being interpreted as HTML.
[0] https://github.com/afaqurk/linux-dash/blob/master/sh/ip.php#...
[1] https://github.com/afaqurk/linux-dash/blob/master/sh/ps.php#...