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I actually submitted the Perfect Dark wiki article to HN after reading about Isamu's passing:
http://en.wikipedia.org/wiki/Perfect_Dark_(P2P)
Screenshots: https://www.google.com/search?biw=1097&bih=609&tbm=isch&sa=1...
Basically, you dedicate some space on your hard drive to the program, which then stores chunks of unidentified files there and constantly uploads to other clients - it's true decentralized file storage with a degree of plausible deniability. You can search for files you want, and after you've downloaded them, you can vote on them to extend their lifespan or bury them.
It was a cool setup when I tried it back in '08 or so, giving off a very cyberpunk[2] feel with its anonymity/tripcodes, spartan plain-text-on-black-background UI, and the scrolling chatstream of Japanese comments (often with SJIS text art) posted by other users. In the end I didn't actually use it for anything, but it felt like a futuristic BBS.
It would be interesting to see a global equivalent emerge, maybe built upon bittorent DHTs/magnet links. Maybe one already has, e.g. on Tor?
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[1] The Japanese network security firm NetAgent announced last year that it was able to decrypt Perfect Dark's security and thus be able to compromise the anonymity of the network. http://www.animenewsnetwork.com/news/2010-06-10/2nd-man-arre...
[2] Considering that PD v1.02 is codenamed "Stand Alone Complex", a reference to the fictional emergent phenomenon of stand-alone individuals spontaneously acting in concert without coordination (coined by the Ghost in the Shell TV anime), its cyberpunk inspirations are quite evident.