While frequently with these articles you have to wonder about the validity of all parts of the story, I can say I've had A similar experience from a consumer perspective. I was trying to book hotels for my wedding and couldn't find a hotel that I knew was in the town my in-laws lived in.
I looked up the hotel on the corporate website and it showed it as completely booked, and this particular had didn't show up in any searches for rooms because of that.
I ended up calling them and found out they had left the chain and were becoming independent and had plenty of rooms. So I can't confirm this small business' story, I Can confirm that similar things happen.