Even with a Threadripper you're at the mercy of the motherboard design.
I use ROG board that has 4 PCIe slots. While each can physically seat an x16 card, only one of them has 16 lanes -- the rest are x4. I had to demote my GPU to a slower slot in order to get full throughput from my 100GbE card. All this despite having a CPU with 64 lanes available.