One thing that open source libraries do tend to miss is that very important extra metadata - for example, Phase One IIQ files have an embedded sensor profile or full on black frame that is not yet encoded into the raw data like it typically is for a NEF or DNG from many cameras. It does seem rawspeed handles this from a quick scan of the code.
It can get more tricky - Sinar digital backs have an extra dark frame file (and flat frame!) that is not part of the RAW files, and that is not handled by any open source library to my knowledge - though I did write a basic converter myself to handle it: https://github.com/mgolub2/iatodng_rs
I'm not sure how DNG would be able to handle having both a dark and flat frame without resorting to applying them to the raw data and saving only the processed (still unbayered) data.