I think this is a very positive trend towards more minimal software and more self-contained Java servers. Being able to ship (server) software as a single JAR file with everything you need embedded makes life a lot easier. It is very nice not having to fiddle around setting up servlet containers, configuring them, deploying applications into them and then, inevitably, having to restart everything when a rogue application decides to ruin the party for everyone. (And it just gets worse when you try to automate it).
One thing I'm still looking for is a good skeletal project for a REST server making use of JAX-RS annotations, Netty and having support for asynchronous request handling. Something that we could turn into a really skinny Maven archetype and teach new programmers to use.
(Obligatory disclosure and shameless plug: I work for Comoyo. If you find these things interesting/exciting and would like to come work for us feel free to contact us. We're hiring :) )