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I dream of Linux on this Mac mini.

VMs work and you get amazing perf. Dream granted

Is there any noticeable latency in graphics using a VM? As far as I remember VMs were a disaster for latency some years ago (Windows or Linux host).

What's your best choice for hypervisor? Virtualbox? Parallels? Or what do you recommend for this unit?

UTM works quite well. As does parallels.