A relevant story for this:
When Europeans came to Senegal they perceived the drumming as being irregular and chaotic. Through taking a class on this drumming I have been able to appreciate how much subtle time differences not represented by western music notation play a role in this music, and also how complex the rhythms are (even when just approximated via western music notation)
Very often there is an implicit discretization that happens before these analyses of music are run and it’s easy to choose a wrong one or for there to not be an easy and human interpretable way of defining the domain of your probability distributions required for such an analysis.
Another example: in pop music timbre plays a much bigger role than in classical music as artists have experimented with vocal styles, synthesizers, and many other ways of shaping sound which cannot be represented by classical music notation.