They're coupons. They apply to drive through and dine in orders.
Extreme price discrimination against people who don't know better/don't bother/etc.
McD has the most generous coupons in their apps among fast food chain and there is basically no limit.
Note that the price was $6.69 at that McDonald's and the one at Stanford Shopping Center. But it was $6.09 at the locations on El Camino Real in Redwood City, Menlo Park, Palo Alto and Mountain View.