So at least according to him we've lived in that world for the last 5 years.
As a person working with / tangentially to people in the same field I would say that it's made things faster and more scalable, but protein structure isn't the be all end all of things. Researchers use AlphaFold a lot for filtering potential candidates, but that is only one step in a lot of steps. A SNP mutation -> protein structure change -> functional change is already difficult without then considering that the vast majority of mutations that create function change in humans are not in exons, so something like AlphaFold (in the form I'm familiar with) would be useless for those as well.
Eventually though an AI system that can go mutation->function change is entirely possible, although it is much much further in the future. In that case though I think you'll be quite close to a future where combined with things like CRISPR therapeutic treatment for all heritable disease would be possible.