I remember having to negotiate with Stripe the removal of their lowest limits. The quantum of unit I was billing on my cloud platform was such that you could consume just enough CPU and storage to end up with a $0.01 invoice at the end of the month.
It was impossible for Stripe to process this payment. IIRC their lowest limit was $0.50 or $0.10. I guess they had this limit in place to prevent abuse and limit fraud. As we had similar hard-coded heuristics for the same reasons.