It's sort of a pet peeve of mine that "the immune system" is somewhat misleading nomenclature in that if I say
digestive system or
circulatory system, it's possible to name all the organs in that system. There's no similar list of organs of
the immune system because it just means "how the body defends itself."
Your skin is a first line of defense against invaders.
The mucus in your respiratory tract and gut is a first line of defense.
Your bone marrow is where white blood cells get produced.
Etc.
The antigens we produce are not the entirety of the immune system. It's like saying the alarm is all that's involved in securing a building and hand waving off the walls, doors, locks, etc.
There are myriad ways to trick the white blood cells and the body also has ways of killing stuff other than the white blood cells.
For my example, no, it's not pertinent.
People with cystic fibrosis are prone to being too acid. Everyone in the CF community knows this but it's not deemed medically significant and goes largely untreated.
The body will strip the bones of calcium to mitigate excess acidity in the blood and people with CF are prone to very early onset osteoporosis. But it's also known that high levels of calcium inside a cell are associated with cell death.
Instead of drawing the conclusion that calcium is being used to buffer the cell against chemical derangement, some people with CF try to limit consumption of calcium because they they the calcium causes cell death rather than thinking the calcium signifies a desperate attempt to mitigate extreme acidity.
It's 3am. This no doubt rambles.