You need "2 <ENTER> 3 +" to add two and three.
Your "3 <ENTER> +" is adding 3 and 3.
Your "3 <ENTER> +" is adding 3 and 3.
Sounds complicated, but in practice you don't think about it at all.
I use an HP 48G+ frequently and I pretty much do both styles without any obvious rhyme or reason from my viewpoint. I just sometimes do one or the other.
4:
3:
2:
1:
So, if you input 4 [ENTER], 3 [ENTER], 2 [ENTER], 1 [ENTER] you have:
4:4
3:3
2:2
1:1
But if you input 4 [ENTER], 3 [ENTER], 2 [ENTER], 1 you have:
3:4
2:3
1:2
1
if you then press +, you get 3 in both cases, which is the sum of the bottom two lines in the display.
Those are either the same as the "old" x and y registers or the sum of last input and the bottom register, same as the old x.