Because life does depend on these deposits at the surface. That’s why this is a huge danger to globally ecology. They feed a unique ecosystem.
Any manual intervention into an ecosystem generally requires establishing an indefinite commitment to more manual maintenance.
Who determines what “optimal” means? Who implements the optimization? Who pays for it? What happens in a few decades when people lose political interest in the project? Which creatures do we optimize for? Why are we doing this at all? How have similar projects fared in the past?
I can tell you haven’t seriously studied ecology from the way you are approaching this question, so I’m not too worried. But consider questions like those as you ponder this scenario.