I don't think this paper can be taken as sufficient evidence to rule out nutritional deficiencies that could contribute to mental health issues (e.g., decreased B vitamins, iron, vitamin D, tryptophan, etc). I know that when I diligently take these kinds of supplements, I do have more energy and sleep better. However, the "humans are destroying the world" sad feelings that drove me to stop eating meat persist, making me wonder if this is quite confounded relationship.
You have to switch it up sometimes to get all of the amino acids humans can't synthesize, but it's not exactly hard. Rice and beans (a staple in huge parts of the world) contains all of the essential amino acids you need and is a "complete" protein. There are many such examples.
There's nothing special about cows or pigs or chickens. Our bodies are so similar that we mostly use bacteria to digest meat, which is why you lose the ability to stomach it if you stop regularly eating flesh. It's also why we're looking at pigs for organ transplants.
The main supplements for vegans/vegetarians are omega-3s and B12. Both are available from plant sources, and the latter is given as a supplement in feed since animals only synthesize it on a grass-fed diet.
I did a quick search and found:
"Iron from food comes in two forms: heme and non-heme. Heme is found only in animal flesh like meat, poultry, and seafood. Non-heme iron is found in plant foods like whole grains, nuts, seeds, legumes, and leafy greens. Non-heme iron is also found in animal flesh (as animals consume plant foods with non-heme iron) and fortified foods."
Let's start with the fact that the human stomach acid pH which you can feel free to Google. It's nothing like the other animals he's talking about. Our stomach acid is extremely acidic due to our early evolutionary history as carnivorous carrion eaters. He also parrots another myth which is that once you are vegan you lose the ability to digest meat. My father has been vegan for 20 years and I was vegan for 5 and was able to digest meat right away with no issues when I went back to meat. It's a myth repeated by vegan ideologues and is completely unfounded in science.
Do I think someone can be very healthy on a vegan diet? Yes. But the last people you should ever listen to are vegan ideologues. They already have an answer in mind and do nothing but cherry pick facts to support their chosen answer.