It's not the difference between C# or Db per se, it's a function of what note in the chord it is occupying.
Presume a base note of A is being played and the violin plays a C# functioning as the major third of an A major chord. The ear would want to play the C# justly intonated to the root note A, or maybe a compromise somewhere between equal temperament and just intonation.
See for example https://music.stackexchange.com/questions/113812/violin-tuni...
there's a lot of nuance. A lot of playing it by ear. :)