Yes, that is an issue, but people misinterpreting or misusing will always be an issue whenever you create something. That should not invalidate the goodness and wonderfulness of the thing created.
The problem with the Bible is that it's so unclear and contradictory, the reader is able to cobble vastly different theological perspectives together. Hence thousands of denominations who do not get along and historically were violent towards each other. The church up until recent history was a violent institution of power.