Unfortunately I don't have access to that paper, and the timeline isn't in the abstract. The abstract mentions it took a long time to be accepted.
Also. For clarity (you may know this, but others may not) I want to distinguish very clearly the difference between a silent prayer and meditation.
A silent prayer is verbalized intention within your head, sometimes mouthed. If you were to look up Judaism's silent prayer, it is repeating a ritual sequence of words - the meanings of which you should know. As traditionally conceived, it is addressing the Eternal as a Person.
The different meditation approaches I've encountered - conventional "Western mindfulness" and a more intense secular Hindu system - are focused on detaching awareness. Sometimes mantras are used/repeated. It is exceptionally variant from the early silent prayer approach, or even the nominal silent prayer approach of today.
Contemplative prayer did start with the desert fathers, I think.