...only to find it days later (= billions of years of simulated time), by which point the simulated life had figured out that their universe was written hastily and its laws were full of subtle bugs, like floating-point rounding errors showing up in physical measurements. Their technological advance let them move stars around, which they grumpily arranged in a message saying "your code sucks".
Can't find it at the moment, does anyone recognise the reference? It could be in one of these books, I suppose, but I don't have them.