What is the standard tool the industry uses to analyze pictures like this? I see these are JPEG's, that can't be the best format for this type of data, is it?
GDAL (https://gdal.org) is a wonderful tool that can handle essentially any geographic raster image imaginable. Tools like ArcGis or Grass can also deal pretty well with hyperspectral images. Lots of GIS shops also roll very customized image pipelines if they have particular needs.