Some language interpreters keep the "virtual" stack and the C stack separate like this, including current versions of Lua. As you suggest, this allows Lua to support coroutines which each have their own virtual stack.
However other interpreters, such as CPython, keep both stacks synchronized. In this case, a call in the interpreted language corresponds to a call in C - recursively back into the main interpreter loop. This is why Python's generators do not have independent stacks.
The awfully-named "Stackless Python" [0] breaks the synchronization between stacks, to allow Python to support stackful coroutines.
At least, the above was my understanding until recently. The upcoming Lua 5.4 changes to using a recursive call [1], like CPython, but still supports stackful coroutines. I don't know how this is implemented.
[0] https://github.com/stackless-dev/stackless
[1] https://github.com/lua/lua/commit/196c87c9cecfacf978f37de4ec...