He also never thinks small. I thought I knew "the point" of Diaspora about 6 or 7 times, but then he just "zoomed out" and made the last point look small and trivial by comparison. The opening chapter of that book is so abstract and yet describes the birth of a consciousness in a way that feels understandable, believable, and internally consistent.
If you love finding interesting puzzles to reason about, then I strongly recommend Egan's books!
I haven't read Permutation City, though. I'm bumping this one to the top of the queue :)