No, you mis-read. chaorace said that Windows EXEs running in Proton gives them better results than running the Linux binary that the game developer ships ("native"). AnIdiotOnTheNet stated that Windows APIs are more stable and better documented than Linux APIs.
As a long-time Linux dev (see my profile), I have also found this to be true. Linux userland APIs are unstable and change all the time. Some transitions that come to mind that have affected me personally: ALSA->pulse; libudev->libudev2->systemd; gstreamer 0.10->1.0. All of those changes required modifications to my software, and the backwards-compat tools that are provided are buggy and insufficient. Meanwhile, you can still write and run winmm[1] applications on Windows 10, and they will work in almost all cases. It's simply the case that the win32 API is more stable than Linux userland APIs, so it's entirely plausible that games will run better in Wine, which shares that stable ABI, than they will on Linux, especially as time goes on and Linux userland shifts yet again.
[1] winmm dates to the Windows 3.x days!