The author berates Debian for patching many upstream software packages to conform to "the Debian way", and then says:
> The kernel and base system is completely separated from the third party applications and base system configuration goes into /etc while all third party configuration goes into /usr/local/etc.
Doesn't that mean that FreeBSD has to patch all third-party software to look for its configuration in /usr/local/etc, creating a "FreeBSD way" that is just as much at risk as breaking upstream software, making its documentation not apply etc. as the Debian software?
Or is there a real, technical difference that makes one kind of modification less intrusive than the other?