If you set up a circuit where you've entangled two qubits so that they should come out as the same value (00 or 11) and the configuration says they should come out with 50% chance of either, the simulation will show that. The outputs of 01 and 10 will never show up in the simulation. But in the real world, there's still a chance that you get those. You'll likely (on IBM's quantum computers) get something like 1-5% 01, 1-5% 10, 45-50% 11, 45-50% 00 (again, over thousands of runs).
If you want to see how this plays out with simulations and real quantum computers, IBM [0] has free access (constrained by credits when you want to run on real quantum computers, they reset each day).
Software simulates what's supposed to happen while the hardware only approaches it through many repeated trials.