Some of these links go directly to the retracted paper, some go to the retraction notice (where available), and some go to reports of software bugs which impacted others' results but didn't cause any retractions. This list is of course incomplete, but here are a few, mostly pulled from Retraction Watch:
https://dx.doi.org/10.1038/nbt0308-274
https://dx.doi.org/10.1371/journal.pone.0038234
https://dx.doi.org/10.1371/journal.pcbi.0030158
https://dx.doi.org/10.1126/science.314.5807.1875b
https://dx.doi.org/10.1186/1471-2105-5-80
https://dx.doi.org/10.1038/nm0610-618a
https://dx.doi.org/10.1093/bioinformatics/btx811
https://dx.doi.org/10.1200/jco.2015.62.0294
https://dx.doi.org/10.1038/s41562-018-0507-0
https://dx.doi.org/10.1177/0022146515595817
https://dx.doi.org/10.1021/acs.orglett.9b03216
https://dx.doi.org/10.1073/pnas.1602413113
https://dx.doi.org/10.1093/cje/bet075