The Paradox of Tolerance is just a rephrasing of the Paradox of Pacifism. I'm not convinced it brings anything ideologically new to the table.
I'm not a pacifist, and by extension, I don't believe we should tolerate everything. I agree with Karl. But I still get very suspicious of people who bring this quote up, because they're arguing about something very basic that pretty much everybody already knows, and they're not answering the more important question: which things should we violently oppose, and how should we oppose them?
Most people already don't believe that we should tolerate 100% of literally everything, and the people who do are not going to be convinced by an argument they've already heard 1,000 times. I promise that pacifists already know how sometimes violent people kill pacifists. Advocates for universal tolerance already know that their philosophy can be abused. This argument was around for thousands of years, even before Karl Popper was born.
So ignoring the pacifists that will all just roll their eyes when they hear this quote, and assuming that someone isn't a pacifist (ie, the vast majority of people) the more useful followup questions are:
- How do we define the intolerant? Is it literally people who fight against tolerance, or is it about causing harm, intentionally or incidentally?
- Is (in)tolerance fungible? If someone tolerates an intolerant person, should they be treated like a similar liability? How many degrees of fungibility should we go down?
- How long should we wait before we decide that suppression is necessary? Is it justifiable for us to preemptively suppress a community that is likely to become violent in the future?
- What means are acceptable during suppression of intolerant ideas? Are there lines we can't cross? Are we forbidden from using stuff like propaganda?
There are tons of smart people who have smart, interesting takes on those questions. And if you go through history or even current-day events and look at different communities, you'll find that they all kind of come up with their own answers.
So when people pull out this quote, it's like walking up to two people debating whether we should ever assassinate a dictator and saying, "sometimes wars are justified." Well, yeah, but we knew that. Is this particular war justified?