Deep copy/deep extend is a must in every programming language ever. I have no idea why 90% of the environments I ever programmed with make it so damn hard to deep copy data. In javascript it is kind of comical. [1]
Traversal utilities like closest/parentsUntil/nextAll/nextUntil is something I miss in most standard libraries. No for DOM manipulation, but for traversing lists and such. Until/while idioms are par for course in imperative contexts but I miss them in functional programming contexts. Not that they're that hard to implement with a couple lines :)
Delay is further proof that the jQuery API design is nothing short of amazing. I wish more APIs were like that. The only thing that comes close to me, albeit in a completely different domain, is LINQ.
I had no idea about End. That's point-free programming black magic. [2] Love it.