The probe has limited data storage capacity and even more limited bandwidth to send it back to earth.
I’m guessing they have a protocol to prioritize data from different instruments as well as prioritize data purging if there is an opportunity to look at something more interesting before everything could be sent back home.
It can be a heartbreaking process for some of the teams for sure.
My best bet is that they get some initial indication of what data was collected then prioritize based on what they think is the most interesting or valuable from what was collected.
They were still retrieving data form the original Pluto flyby as this one was planned I’m not sure if they even got all the data from pluto yet.