Normal government workers in NY cost about 150% of salary due to benefits and pension costs. A big part of this is that NY law requires that the pensions get funded... many states ignore pension contributions and operate at a lower cost.
MTA has other unusual issues... they have a very powerful union that has negotiated wacky deals over the years. In some areas, pretty much everyone retires with dramatically more expensive disability retirements. (See: https://nypost.com/2014/08/06/nearly-all-lirr-workers-have-d... )They also have the ability to "spike" pensions with overtime that most NY government workers outside of police and fire cannot do.