When I was still living in Tokyo and went shopping for groceries near my house using my Mamachari, I would get stopped at least twice each way.
To be fair though in the middle of my trip the Akihabara massacre happened and visible police presence went way up after that.
My friend and I spoke the least of anyone in the group, and were actually in Akihabara at the time with no idea at all what was going on. We were there to return a camera, and we noted the place was CRAWLING with news crews. Didn’t figure it out until we got back to our friends who had been watching the news, terrified something had happened.
We were randomly passport checked before that happened however.