Hopefully Coinbase isn't using MongoDB anymore for handling transactions.
I will say that while I know almost nothing of Coinbase's internals, I have seen enough of two separate exchanges to require a signed NDA. I was intending on working with them to suggest a solution to an issue they were having, and in both cases once I saw their platform I turned around and ran the other direction as quickly as possible.
One of them, I don't mind saying now, was Cryptsy.