This is a faulty assumption and is what leads to the wrong conclusion. The probability of 0.5% is for a randomly selected river. That is, if you went and examined 200 randomly selected rivers, 1 of them (on average) would be redirected due to natural variability.
That does not imply that the remaining 199 were redirected due to global warming. It does not even imply that the remaining 199 were redirected at all!
What is needed is the percentage of rivers that have undergone this redirection. Here's a simplified example: If it's ~0.5%, you conclude it's just natural variation. If it's >0.5%, you conclude that something (possibly global warming) is increasing the number of rivers that are being redirected. If it's <0.5%, you conclude that something is decreasing the number of rivers that are being redirected.