In addition, if you're still reading this, be ready for this to be not-the-most-interesting software project. Most of it will be reading vendor documentation and hunting down config errors. And compiling. And figuring out FDA stuff.

Coding-wise you probably won't learn a whole lot. You'll be using old technology and likely limited from using any fancy techniques you want to cook up. Accept that in advance. Thrive in that actually; force yourself to take the safe road software-wise so you can take the time to read through FDA docs and understand all the lingo better. Also spend time with your EE and learn more about that side of the coin. Spend time with the customer-facing side and learn the market. Learn some actual medicine so you're seeing the device as a tool rather than as a platform. All this stuff is way more valuable in the medical field than knowing the latest five JS frameworks (or Haskell plugins, or ruby test platforms, or whatever software-y stuff floats your boat).