From the fine article:
"Prolonged and excessive aerobic exercise efforts such as
marathons, ultra-marathons, full-distance triathlons, and
very-long-distance bicycle rides are inconsistent with our
genetic heritage. The pattern of exercise for which we are
genetically adapted involves a diversity of activities
performed intermittently, at moderate intensities and
moderate durations. Even in highly trained individuals,
high-intensity, multi-hour endurance exercise effort is
associated with damage to the myocardial cells and
connective tissue."
If your idea of hunter-gatherer fitness is running marathons all day, perhaps reading the article would enlighten you otherwise?
edit: See Table 2 in particular for a list of hunter-gatherer activities and corresponding modern activities. Note only 1 or 2 out of 13 activities involves running.