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bioinformatics

331 karma · joined June 5, 2009

27e519ebeedcac2cd8f5a4eb901a894dbcecd80780c6a1f4851ba6616d778b21
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bioinformatics··on Attenborough gives stark warning on climate change to UN [video]
There are many solutions to your problem, some simple, some more complex.
bioinformatics··on Letters from House members to cable providers [pdf]
I am surprised that they didn't ask for a list of the subscribers including SSN.
bioinformatics··on Sequencing your DNA with a USB dongle and open source code
Computational requirements are quite high, but OK if you have good GPUs on hand. A coronavirus sequenced sample on the fast mode without GPUs would take 3-4 hours to complete, while on the high accuracy mode days. GPU access would speed up performance considerably.

Error rate for MinIONs is still quite high (10-15%), so a human genome sequencing would be quite inaccurate in some regions.

Sequencer is quite cheap, reagents and flow cells are a little bit more expensive.

bioinformatics··on 18.7 Million Americans Vaccinated
Yes, everyone that is alive today will be dead one day.
bioinformatics··on Iran's supreme leader tweets attack threat to golfing Trump
It was before the election.
bioinformatics··on Turn off that camera during virtual meetings, environmental study says
I think it would be great, all the Zoom servers in China might be moved to some place with better standards.
bioinformatics··on Decline the 15 Minute Post-Vaccination Waiting Period
I get my medical advice from people that make great experiences.
bioinformatics··on Nearly half of adult Canadians struggle with literacy
Yes, noticed that by reading the comments on CBC's site.
bioinformatics··on Twitter shuts down account of Sci-Hub
You missed the worldwide vote for the company that should hold the only truths in all matters? Twitter won. Google second and FB third.
bioinformatics··on Andrew Yang Enters Mayor's Race with Scaled Back Plan for Universal Basic Income
Municipal, and not universal. So it's BI.
bioinformatics··on I’ve changed my mind on Bitcoin
Stopped at Coelho ...
bioinformatics··on “A Headline That Will Make Global-Warming Activists Apoplectic”
So profound and poetic.
bioinformatics··on Google Has 'Shattered' Its Pipeline to Black Talent
They should create a union.
bioinformatics··on Google’s New Union Is Already Addressing Political Issues
I am pretty sure the work environment at Google is extremely oppressive, with low salaries and and top-down evil capitalist only approach. After all how can millionaires Google employees can have their voices heard if they don't unionize? Maybe they will demand better snacks in the cafeteria and a new foosball table at the end of the indoor slide.
bioinformatics··on Google is monitoring emails for 'disruptive' language after workers set up union
No one is forcing the talented engineers working at Google to work there. Especially when a do-not-evil-motto company is monitoring (AKA reading) their emails.
bioinformatics··on A Polar Vortex collapse sequence has begun
Wait a couple of years, or maybe four, nah, let's say 10, or 20, probably close to 30 and snow will be a thing of the past. Better say, 50. OK, by 2100.
bioinformatics··on A Marxist Analysis of the iPhone (2019)
Do they have ads? I don’t like to get my browser history dirty.
bioinformatics··on Researchers retract controversial female mentorship paper after Twitter outrage
Science as a whole. Wait and see.
bioinformatics··on Researchers retract controversial female mentorship paper after Twitter outrage
Science and academia are dead.
bioinformatics··on Permanent suspension of @realDonaldTrump
I am all for giving everyone in the right, a number tattoo so we can keep them under control, and maybe put them in specific locations around US and the world so their influence in a normal and joyous society won't be a problem for us common folks.

What do you think?

bioinformatics··on The Earth has been spinning faster lately
I think it's global warming. It has to be.
bioinformatics··on Study Predicts the Amazon Rainforest Will Collapse by 2064
You too, champ.
bioinformatics··on Our Response to the Violence in Washington
You can include the majority of commenters on this site too as the effetes.
bioinformatics··on WHO Deletes Naturally Acquired Immunity from Its Website
So, John can you explain the Science behind these things? Thanks a lot.
bioinformatics··on How Americans Came to Distrust Science
That's spot on. It's a self inflicted wound.
bioinformatics··on What does privacy mean under surveillance capitalism?
Is it worse or better than Surveillance Communism?
bioinformatics··on UK coronavirus variant may be more able to infect children: scientists
England, mainly with Ferguson, and now with this new "super" mutating virus is ending the last dime of credibility that scientists had with the civil society. After this pandemic, no one will ever listen to a scientist again. Maybe not everyone, but a good percentage of the population for sure.
bioinformatics··on UK coronavirus variant may be more able to infect children: scientists
I would close schools forever, but that's my personal opinion.
bioinformatics··on UK coronavirus variant may be more able to infect children: scientists
Genetic drift that fixates 14 new mutations, including deletions, in the most negative selected gene in this virus is an abomination, almost statistically impossible, very very close to 0. Even if the incubation and infection time inside this one individual was enough for 1,000,000 generations there's no way for something like that to happen.

"The accrual of 14 lineage-specific amino acid replacements prior to its detection is, to date, unprecedented in the global virus genomic data for the COVID-19 pandemic."

No, this unprecedented on any living and non-living thing that we know.[1]

"In all of this, its worth remembering we've never tracked an epidemic in this much detail before, so perhaps this sort of thing is just par for the course."

We tracked very well the flu during its high season, and influenza genomes are used constant to monitor mutations and other aspects of viral evolution, population genetics and phylogeny.

[1] https://www.pnas.org/content/96/24/13910

bioinformatics··on Vindicated scientist demonstrated surgery alternatives for stroke victims
well, many don't know what science is, what scientific method is, and actual scientists.
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