Sounds like a major flaw to me. What if communication back to Earth is disrupted? Having the entire mission rely on a communication link is not a good idea. The people on Mars should be totally capable of conducting all manual repairs and bugfixes on their own. All of the software they use to run the entire base should be open source, available in a local Martian repository, and at least two of the people on the planet should be intimately familiar with the codebase and how all of the equipment works.

Ideally, they should also have physical books documenting all of the mission-critical stuff.