Maybe it was some passengers/cargo they were interested in. </tinfoil>
It's completely absurd. If the president of the United States was on that flight, I'd give it more credibility. However, which passenger on that flight was so valuable, and surrounded by so much security, that hijacking the flight made sense?
The same goes for cargo, it must be easier to make friends in the right places, or pay people off to have that cargo "misplaced".