I don't really like arguing back and forth, but the way I read that is he is describing calculations in QM, not the "why" behind QM. QM is not a mystery in calculationally, it is a mystery in interpretation.
The generalization of probability theory to include "negative" probabilities, really, amplitudes is just the method in quantum mechanics. It's like knowing what a derivative is to obtain exponential population growth. That's just mathematics. No one says people who have solved dN/dt=aN predict that bacteria will grow exponentially, it's just how a system acts like that would behave, and we found an example.
But, I've thought a little more about it, I think my original comment was touching a personal bias more than making an argument. I asked, "why does the time evolution operator have to be on a fock space and why do P and X commute like ~i?" I'm not sure physics can answer beyond that at this point, since it matches experiment, we should or could just accept it the way it is.
May be there is no "deeper" reason after all.