This sub-bit jitter and interference can travel along with a digital file and sneak right past your ordinary bit-level error detection and correction, no matter how lossless you make it. That's because these errors aren't visible in the bits. They occur at a deeper and more subtle level, in between the bits.
Even if you prove mathematically that two files contain the exact same bits, you can't prove that the human ear won't hear any difference, can you?
Same file -> same playback.
If you hear the same sound file twice (or two identical files) and hear something different, you software is broken or you're imagining things.
Can you turn this into mere "bits"? Of course not!
That's why it is so important to protect against sub-bit quantization errors, and this can only be done with proper interconnects. Ordinary cables allow the bits to travel willy-nilly until they jam up against each other creating a brittle, edgy soundstage. Quality interconnects are tuned, aligned, and harmonically shielded to keep those precious bits - and the all-important spaces between them - in a smooth flow.
And then, we can hear all of the things that make us human.
That comment is just perfect.
(I put the scare quotes on because I haven't actually bothered to check if there is an audible difference. But it does confirm the GP's experience.)
"military-grade encryption"