Stackoverflow and Trello are always held up as the shining examples of how the Microsoft stack is able to hold its own. That's great, I even know people that insist on running their web servers on Apple hardware. Whatever floats your boat. But if you're running a competitive business, if you're going to be using a lot of CPUs and if you will eventually (or already) be faced with lean and mean competition then you are probably better off on an open stack.
Try to imagine Google, Amazon, Ebay, DropBox or AirBnB on the Microsoft platform. And note that two of the above are re-selling their linux based platforms to other users at a profit.
Btw stackoverflow uses plenty of CentOS, I guess licensing from RedHat was too expensive?