There is no docker like solution for Windows. All the big players (VMware, Microsoft, Symantec, etc) do tricks to isolate the applications. The tricks are instrumenting API calls and adding filtering drivers. With these solutions only less than 70% can be virtualized and the process can be really difficult.
Because from what I've seen of the current state of docker, non trivial linux applications seem to have issues in docker as well because they depend on specific things which are not being namespaced well (say /sys manipulations for example, ioctls, or even use filesystem specific APIs).
Docker seems to work well as long as one stays close to web server functionality. (aka LAMP like stacks which tend to only manipulate network sockets and traditional files).
One difference in the approach is that, for example, with Docker.io you can have your own isolate network interface while with the current Windows approach this is not possible.