Oh electricity, such a wild beast. If we only could find a way to turn it off again after we've let it go.
Open the outer door, enter the middle area, wait for the inner door. (lather, rinse, repeat for n > 2)
http://en.wikipedia.org/wiki/Barrage_%28artillery%29#Moving_...
So there would be a number of active zones at a time, each one slowly moving downriver, pushing back any invading carp in front of them.
You could switch off the electrodes in any section of the river, and then when you switch them back on again later, the pattern sweeps any occupying invaders back out.