I did some digging into this a few months ago and couldn't find anything conclusive. All I found were blogs, quotes, etc by wannabe scientists.
Of note:
• http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3222987/
Nearly all plastics (even the BPA-free ones) leach estrogenic activity chemicals
• http://pprc.org/index.php/2013/networking/p2-rapid/do-plasti...
Basically said that there is little evidence in either direction
• http://www.codlo.com/faq.html#.Ux5Ly-ddWlg and http://www.chow.com/food-news/107898/cooking-sous-vide-in-pl... and http://www.sfgate.com/food/article/Author-says-use-of-plasti...
Says that bags made from polyethylene (PE) are safe while bags made from polyvinyl chloride (PVC) are not.
• http://www.beyondsalmon.com/2010/08/cooking-in-plastic-how-s...
SC Johnson (Ziplock manufacturer) themselves do not recommend cooking w/ their bags. Note their bags are made w/ the supposedly safe (per the links in the previous bullet) polyethylene (PE)
Right now I'm very intrigued by sous-vide but am too paranoid about the plastics to make the jump.