I feel like having such a system in place would probably end up breaking a lot of the legitimacy (since you'd need over half of miners to agree to it, in which case some sort of "central" entity would exist)
BIPS didn't announce that they'd been compromised until over a week since the funds were sent out, so it's completely impossible at this point. If you wanted to get a transaction with one confirmation reversed, you would need to convince the two largest pools (ghash.io and btcguild) to mine a fork that doesn't contain your blacklisted transaction in under 10 minutes, and even then they'd create a very noticeable reorganisation. You'd also then have to race to get your funds out, as you know your keys have been compromised.
It's fairly impossible really.
Seriously, the moment I hear about a blacklist of coins on bitcoin is the same day I buy $5,000USD of Litecoin. I'll be a millionaire within 8 months.