Fukushima is very troubling, but at least it was only an accident. The overfishing mentioned in the article is systemic.
That said, overfishing is probably the worse problem since it's not tractable to enforce regulations (since police aren't on site to ensure that there isn't too much "extra" catch thrown back, etc.). At least it would be possible to mandate the construction of seawalls.
[1] http://www.dailymail.co.uk/news/article-1386978/The-Japanese...