That should only matter if your motivation for developing a poker bot was to develop a program that could demonstrate "skill" rather than one that could produce the highest profits (such as if you were a computer scientist). If you wanted to produce the highest profits, then your metric for comparing implementations would be net profit over the long run.
It is okay to come up with some set of metrics to attempt to measure "skill" in the short term while developing your algorithm, perhaps, but that's when you're in "computer scientist" mode. Ultimately skill is irrelevant if your goal is to make a profit over time, and if it were not, I suspect you would not be working on such a project in the first place.