If correlation doesn’t imply causation, then what does? (2012)
michaelnielsen.org
michaelnielsen.org
Ref list: http://vserver1.cscs.lsa.umich.edu/~crshalizi/notebooks/caus... Chapters: http://www.stat.cmu.edu/~cshalizi/uADA/13/lectures/ch22.pdf http://www.stat.cmu.edu/~cshalizi/uADA/13/lectures/ch23.pdf http://www.stat.cmu.edu/~cshalizi/uADA/13/lectures/ch24.pdf
Incidentally, Shalizi is a great source for going back to the basics. His course at CMU "Advanced Data Analysis from an Elementary Point of View" has course notes and exercises available gratis: http://www.stat.cmu.edu/~cshalizi/uADA/13/. And any time I need to get a reading list, the best place to start is usually his 'notebooks' page.
1) Imagine that most women with a certain disease survive, while most men die.
2) Imagine that most women with the disease take a certain medicine, while most men don't.
3) Imagine that the medicine has absolutely no effect. Women just happen to have better innate resistance to the disease, and also just happen to buy the medicine more because it's marketed to women.
Now if you do a statistical analysis without counting men and women separately, you will conclude that the medicine is very correlated with survival!
Note that there's no way to know in advance that you should slice the population along such-and-such variables, which can be a lot more subtle than just gender. Also note that the example works even if the medicine has a slight negative effect, i.e. you can reverse the direction of correlations by choosing to slice or not to slice.
I think such results make it clear that you can't easily trust conclusions from statistics. One minute you're thinking that cholesterol causes heart disease, and the next minute you're asking yourself, what if cholesterol is part of the body's response to heart disease? That's why we need randomized controlled studies, and theories of causality.
Unless "most" = nearly all, this kind of situation is not difficult to untangle if you have sufficient and appropriate data.
What's most? 50.1%? 70%? 99.9999%?
But, epidemiology is not all of science, it's just one way to do science. So this statement is wrong, or, at least, not complete:
> The standard scientific answer to this question is that (with some caveats) we can infer causality from a well designed randomized controlled experiment.
The more general scientific answer is that we need an hypothesis that can be tested and disproven by observation. Such observations can come from a randomized controlled trial, but a surprising amount of important scientific observations do not. For example, a major confirming test of relativity was to measure the apparent displacement of stars due to gravitational lensing during an eclipse. Obviously there is no way to create a random double blind study of this. (Unless one were to stare too long without eye protection! [rimshot])
But wait, I could hypothesize that saying "blutarski" when flipping a coin will make it land heads up, and if I only do the observation once, my stupid hypothesis might get confirmed. Right?
In this case, yes, a lengthy trial would help provide much better observations. But the more general answer is that a reasonable hypothesis must propose a physical system that could plausibly cause the predicted result. There is no known physical system that connects "blutarski" with coins, or Facebook traffic with Greek bonds. But there is a plausible physical mechanism by which smoke inhalation could lead to lung cancer.
This is what scientists are talking about when they say things like "there's more to science than curve-fitting." But most people do not understand the difference, and that's why we see things like global climate circulation models get mixed up with historical climate reconstruction, or paleontology get mixed up with evolutionary biology.
I'm not sure what you mean by paleontology being mixed up with evolutionary biology, though.
The scientific reality is that Darwin formulated his theory by looking at living species, and the modern study of evolutionary processes does too--primarily viruses, bacteria, and insects, because their lifespans are so short.
Think how the discovery of electricity led to electronics. There is nothing like electronics in the natural world, the only route to electronics is via an iteratively refined causal model of the universe.
'Body' is a rather misleading term to use for what a general AI might need.
And I say 'might' because part of the motivation for the Pearlean program is for discovering under what data and conditions one can infer causality without randomized interventions.
It's the flip-side of extraordinary claims require extraordinary evidence.
Facebook driving Greek debt is implausible and two vaguely shaped curves aren't enough. A formula that predicts to many decimal places over a fair period, prospectively, would be really weird but hard to ignore.
Spanish debt, gold prices or something related on the other hand, would require proportionately less evidence for causation.
This disturbs people because it implies you can get stuck in a pathological view of the world and statistics and evidence won't get you out. Sorry about that.
Edit: And this is pretty the Bayesian Approach. It's just that Bayesian Statistics and Pearl arguments, are themselves just models of the world. You can have others but, even more, you need more of an arguments than "stuff that seems implausible needs more evidence" and all of the more elaborate stuff is going to be specific to a given situation and thus might be applicable to a different one.
Yes, but in reality you don't know that
Plausibility is a subjective measure, and while I would say that, yes, it can be a hint, you cannot disregard something merely because it's implausible
Coming back to Bayesian statistics, the word for this is prior, and its not that you disregard evidence, its that you can quantify both your existing beliefs about reality and the change in your beliefs according to the evidence you see.
Firstly, our hint: we have a prior assumption of the probability that the popularity of Facebook is driving up Greek debt (call it P(Fg)). Then, we observe a correlation between these two things. For the sake of argument, I'm going to make this 0.001 (I'd probably estimate less).
Now, once we see this correlation, we now need to calculate two things: 1. The probability of observing that correlation (call that P(C)). Note that the more extraordinary the correlation, the less probable it is, and the smaller this term would be. In this case, the graph matches vaguely, I'm going to give it a probability of 0.1.
2. Given a world where there is a causation, what is the probability we'd see this correlation (Q: I'm not 100% on this part). Now, Greek debt could plausibly be driven by other things, which would mask the Facebook effect, so there's no guarantee there would be a correlation. This term is called P(C | Fg), and I have no idea what value to give it. Let's try 0.5.
What we want to know is: P(Fg | C), that is, the probability of a connection given we have observed a correlation.
Boom! P(Fg | C) = P(C | Fg) x P(Fg) / P(C)
So our posterior probability (after observing this correlation) changes from 0.001 to 0.001 x 0.5 / 0.1 = 0.005
Also, if you read my post, I'm not "disregarding" anything. I am simply saying that some things have a higher bar than others.
Animals, such as rats and ravens, face this problem all the time, and yet they can meaningfully effect the world in such manner that would imply causal understanding, and a sensitivity towards the difference between mere correlation or a correlation with causal potential.
Humans do the same as well, naive people who have never learned about experimental design, or have never learned the concept of correlation, also make useful judgments on the causal model behind ordinary problems and events.
How did these machines make actionable judgments on causality with nothing more than noisy inputs to their sensory systems? Through what technique did they discern the difference between mere correlation, and a correlation with exploitable causality?
They also are often... racist. Or hold whatever other stereotypes to heart. Racism is just a good example of an extreme position to hold which is often due to assumptions of causality.
"Lots of minorities are in prison. There is a high correlation between being a minority and being in prison. Therefore being a minority leads to being a criminal."
This completely ignores external reasons why minorities might end up in prison more often than others. For instance, it could be that minorities have an equal amount of criminal activity as the general population, but are more likely to end up in prison because of it. Correlation does not imply causation.
I think the number of social issues that arise due to assumptions of causation is quite high, actually, and often leads to poor decision making in policy. That is why it is "dangerous."
Evolution - that is, assumptions that are accurate are favoured since they are more likely to lead to the animal surviving, vs embracing spurious correlations which are likely to get you killed.
Of course, this can break down if we try to apply the cognitive rules of thumb we've evolved to new domains outside our original evolutionary scope - our difficulties in thinking about statistics and probability are a great example of this. The math is trivial, but it just doesn't fit our brains very well without a great deal of cultural scaffolding.
Well it all depends on the actions you take based upon those assumptions. If the action is low risk, low cost then it may be the wise choice. You need to remain aware of the uncertainty and that you are basically guessing until a better understanding is achieved.
One of the dangers is that initial uncertainty is forgotten and wrong information becomes "common knowledge".
Another danger is where there is there actually is causation but running the opposite way to that assumed. For example if a chemical substance is a useful form of self medication for sufferers of a condition there may be a correlation between the use of the chemical and the condition but banning/withdrawing/warning about the chemical would actually worsen the situation.
> South: Democrat (7/94, 7 percent), Republican (0/10, 0 percent)
> Overall: Democrat (152/248, 61 percent), Republican (138/172, 80 percent)
This example is often cited for Simpson's Paradox, but because the South headcount for Republicans (10) and Democrats (94) had such a wide disparity and the Republican headcount was so low, it always seemed more like twisting the data to fit a political narrative than to make a statistical argument. Like other statistical methods, there should be a minimum population size for the paradox to be meaningful.
Has larger sample sizes, all would be valid for statistical analysis. Although this paradox isn't really dependent on a sample size, it is not so much a statistical test. It's a trend that can be observed when looking at sub groups compared to overall averages.
In the above example open surgery was better for both small and large kidney stones and is a prime example of Simpson's paradox. However, one should note that Simpson's paradox can also be subject to further confounding variables. Perhaps patients that were suitable for open surgery were in better medical condition and therefore the open surgery sample was non-random and caused the higher success rate.
The presence of Simpson's paradox, similar to correlation, also does not imply causation.
That is, rather than demonstrating that there is a different correlation between party and vote, it demonstrates that there is a (stronger) correlation between geography and vote.
You should be able to have cyclic graphs, though. W could cause X which causes Y which causes Z which causes more X.
I am actually highly skeptical of the entire notion of the article, but I haven't had time to finish the article yet. My skepticism comes from the fact that causal relationships can be explained by identifying and understanding the causal factors at play and drawing relevant conclusions. For example, smoking causes lung cancer because exposure to toxic chemicals causes genetic mutations. Existing mathematics (such as basic statistics, including correlation) can be used as additional empirical evidence to support such an explanation.
(1) A clear mechanism. Data. My car won't run. Cause. The universal joint at the differential for the rear wheels failed leaving the rear end of the drive shaft on the ground.
(2) A solid scientific theory. Data. I let go of the 2 x 4, and it hit my foot and hurt. Cause. Newton's law of gravity.
(3) Other. Data. There is a correlation between smoking and lung cancer. Cause. Guess that there are some chemicals in cigarette smoke that cause lung cancer. Without actually finding the chemicals, basically test the heck out of the connection, i.e., look for and reject (statistically as in an hypothesis test) other candidate causes, see if cigarette smoke does cause mutations (causing mutations are easier to test for than causing cancer, and nearly every chemical that causes cancer also causes mutations; so, if a chemical doesn't cause mutations, then it likely doesn't cause cancer; if the chemicals in cigarette smoke do cause mutations, then can't reject that they cause cancer and have to keep entertaining that the chemicals might cause cancer and have to keep testing), reject spurious correlations, do some more tests that might reject causality and observe that they do not reject, look for other causes, work hard, get tired, give up, and finally conclude that have done enough work and time to stop smoking.
> If correlation doesn’t imply causation, then what does?
not directly to the article or the discussion here on HN.
I don't think that the article makes much sense.
I gave a very simple answer, (1) and (2). For (3), that's a mess and closer to the discussion.
My view is that for causality, what I gave with (1) and (2), simple, childishly simple, dirt simple, is, unfortunately, in reality, about all there is to the poor, struggling subject.
Put more respectfully, beyond my simplistic (1) and (2), working with causality is super difficult and quite unpromising as in mostly just f'get about it. For my (3) it boils down to ways to reject causality and then we accept causality once we get so tired trying to reject it we just give up and accept it. Why? Because without something detailed and mechanical, say, from chemistry, biochemistry, and the forbiddingly complicated, detailed biochemistry of cells, we are missing anything very solid to call causal. E.g., in my (1), with the universal joint that failed, we have a simple explanation that makes a solid cause; getting something so simple and solid for a cause of cancer from smoking will be super difficult. Don't worry, I don't smoke, but neither do I claim really to know a cause of cancer.
Causality is a great, intuitive idea for humans and animals, but looked at in detail it's tough to establish in all but some narrow situations.
For causal networks, path analysis, Markov random fields, directed acyclic graphs, lots of diagrams with circles and arrows, f'get about it.
For getting causality out of data analysis, mostly just a fool's errand -- f'get about it.
There is a significant reason I concentrated on (1) something mechanical and (2) something from classic physics -- those two darned near cover what can be done with causality. For the biological sciences -- causality is really important but really tough. For the social sciences, they try and try, and my wife did in her Ph.D. in essentially mathematical sociology and my brother did in his Ph.D. in political science, but, net, watching my wife and brother struggle with trying to make causality work in social science, where it's so easy to make it with (1) and (2), I just said f'get about it.
You can entertain my views and my first very short post as a contribution to the discussion based on a lot of background and a claim that more is a fool's errand or just chalk it up to my ignorance.
One more point: I didn't even mention correlation. Why? Because correlation is so far from causality that it's hardly worth even mentioning.
The third meaning is the one that "correlation does not imply causation" refers to. There is no other meaning for that word in that context.
A specific example. Look at [2] and take the "y" axis to be "cigarettes per day" and the "x" axis to be "life expectancy in years". The overall trend is that more cigarettes leads to a shorter life. However, if we find that the blue group are people who do not inhale, and the red group are people who do inhale, the correlation is reversed for all smokers -- smoking more leads to a longer life.
1. https://en.wikipedia.org/wiki/Simpson's_paradox
2. https://en.wikipedia.org/wiki/File:Simpson%27s_paradox_conti...
Hypotheses are cheap. Create lots of them. Being 'wrong' about a hypothesis is awesome. It's the path of Reason.
(Yes, I woke up this morning wanting to capitalize terms for definitional emphasis. Sorry.)
I prefer merriam-webster.
https://en.wikipedia.org/wiki/Correlation_does_not_imply_cau...
Rhetorically, "correlation (does not imply|is not) causation" is often a red herring to dismiss a hypothesis that warrants further investigation, as correlation is essential for establishing causation.
I stopped reading here. Not saying models without loops cannot be useful though.
`b` could cause `a2` though which is very similar to `a` but is separated in time from `a`.
The direction of the arrows shows causation with also implies time has passed though the amount of time is not specified in the model he is using, though it could be added. He has a section latter in the article about why he left it absent earlier and covers how it could be included.
> Further if used like that, then a possible hidden factor could actually be "lung cancer(t=0)", since it could (conceivably) cause both "smoking(t=1)" and "lung cancer(t=2)".
If lung cancer actually caused smoking then yes that would a simple solution. If that was the answer though the very next question would be what caused "lung cancer(t=0)". Which "smoking(t=-1)" if existed would be suspect, and another "hidden factor"(s) of course as well.
My recollection is that this framework of causal inference allows one to ask questions about a probabilistic model that one can then try and measure to test causality.
These questions are interventions or assertions (the do operators) that something happened.
So one would start out with a Graphical Model like in the smoking example which defines a probability model, and then make do assertions on the model for various candidate causes and see what that would imply about the change in probabilities and then design an experiment to measure them and confirm them.
And the book's layout is fairly disjointed.
I may just begin experimenting with the theory, rather than placing it, my life is short.